Unless otherwise specified in the permit or otherwise ordered by the commission, land application or evaporation facilities shall be excluded from the reporting procedure in §319.1 of this title (relating to Monitoring and Reporting Requirements). The commission may exempt other permittees from reporting requirements on a case-by-case basis, provided that the permitted facility shall not directly or indirectly affect the quality of water in the state. Such exclusion shall be set forth in the permit. An exclusion from the reporting procedure, however, does not relieve a permittee from monitoring and record keeping requirements.